i'm using a BIX 2 rad in my current system which is about the same size as the heatercore you said you were gona use and i'm using a YY cube case, what I did that works really well is I mounted the rad flat on the bottom rear of the case on the drive side sucking air from under the case since it stands up on casters and then exausting it out the rear of the case. I did it that way as the idea of sucking air from the front and blowing the hot air into the case effecting the heat on anything not watercooled didn't sound to effective to me nor did mounting it on the back/top and pulling warm air from inside the case sound to effective either.
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Athlon 64 3000+ Venice / Asus A8N-SLI Premium / 2X Corsair XMS 512mb PC3200
BFG 7800GTX / Audigy 2 / Dell FP2001 20.1" / Antec TruePower 2.0 TPII-550
WD Raptor 36.7GB / WD Raptor 74GB / Maxtor 120GB SATA
Water Cooled: CPU Swiftech Storm / GPU Maze 4 / Danger Den Double Heater core / Eheim 1250
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